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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bcam, basal cell adhesion molecule
Sequence ID:NM_020486
Entrez Gene ID:57278
Ensembl ID:ENSMUSG00000002980

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19756137 - 19770480

 Exon Info From UCSC:
NM_020486

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2616148Full LengthBC004826basal cell adhesion molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065232  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020486 NP_065232 Q9R069 ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF109160 AAF14226 Q9R069
AF221507 AAF34657 Q9R069
BC004826 AAH04826 Q99K86
AF346663 AAK83237 Q9R069
AB035511 BAB16053 Q9R069
AK040564 BAC30627 Q8BGB4
AK054001 BAC35614 Q8BGB4
AK075704 BAC35900 Q9R069

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bcam NP_065232 R.norvegicus Bcam 78958   NP_113940 92
H.sapiens BCAM 4059 Gene Info NP_005572 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)