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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sncaip, synuclein, alpha interacting protein (synphilin)
Sequence ID:NM_001199151
NM_001199153
NM_001199154
NM_026408
Entrez Gene ID:67847
Ensembl ID:ENSMUSG00000024534

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 D1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 52768092 - 52907478


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30096466Full LengthBC098489synuclein, alpha interacting protein (synphilin)
40141756IncompleteBC130225synuclein, alpha interacting protein (synphilin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080684  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199151 NP_001186080    
NM_001199153 NP_001186082    
NM_001199154 NP_001186083    
NM_026408 NP_080684 Q99ME3 Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC098489 AAH98489 Q4KMM4
BC130225 AAI30226 A2BDD1
AF348447 AAK30156 Q99ME3
AK016941 BAB30511 Q9D3Y6
AK017012 BAB30548 Q9D3W0
AK044974 BAC32166 Q8BRF4
AK082079 BAC38405 Q8C4I8
AK132346 BAE21118 Q3V1N2
AK160111 BAE35635 Q3TVI3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sncaip NP_080684 R.norvegicus Sncaip 307309   NP_001100849 94
H.sapiens SNCAIP 9627 Gene Info NP_005451 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta