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Gene Info

Gene Information For:Mm. Vat1, vesicle amine transport protein 1 homolog (T californica)
Sequence ID:NM_012037
Entrez Gene ID:26949
Ensembl ID:ENSMUSG00000034993

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101458747 - 101466199

NM_012037 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11529101320061101321589
15301771101321690101321931
17721861101323511101323600
18622032101323703101323873
20332240101324222101324429
22412732101327021101327512

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5320239Full LengthBC025496vesicle amine transport protein 1 homolog (T californica)
6311681Full LengthBC099678vesicle amine transport protein 1 homolog (T californica)
4987705IncompleteBC036169vesicle amine transport protein 1 homolog (T californica)
5066189IncompleteBC024586vesicle amine transport protein 1 homolog (T californica)
6404318IncompleteBC085504vesicle amine transport protein 1 homolog (T californica)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036167  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012037 NP_036167 Q499X4
Q62465
ADH_zinc_N
ADH_N

Related Sequences

 
mRNAGenPeptSwissProt
BC024586 AAH24586 Q62465
BC025496 AAH25496 Q499X4
Q62465
BC085504 AAH85504 Q5RKP0
BC099678 AAH99678 Q499X4
Q62465
AK034795 BAC28833 Q499X4
Q62465
AK145193 BAE26285 Q499X4
Q62465
AK154965 BAE32958 Q3U331
AK159310 BAE34978 Q499X4
Q62465
AK159315 BAE34983 Q3TXD3
AK160891 BAE36072 Q499X4
Q62465
AK170371 BAE41752 Q499X4
Q62465
X95562 CAA64807 Q62465

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vat1 NP_036167 R.norvegicus Vat1 287721   NP_001028855 98
H.sapiens VAT1 10493 Gene Info NP_006364 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)