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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ctnnb1, catenin (cadherin associated protein), beta 1
Sequence ID:NM_001165902
NM_007614
Entrez Gene ID:12387
Ensembl ID:ENSMUSG00000006932

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F4|9 72.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 120933488 - 120960265

 Exon Info From UCSC:
NM_001165902
NM_007614

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5709247Full LengthBC048153catenin (cadherin associated protein), beta 1
5709247Full LengthBC053065catenin (cadherin associated protein), beta 1
5148300IncompleteBC043481catenin (cadherin associated protein), beta 1
5721147IncompleteBC043078catenin (cadherin associated protein), beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001165902 NP_001159374    
NM_007614 NP_031640 Q02248 Arm
HEAT

Related Sequences

 
mRNAGenPeptSwissProt
M90364 AAA37280 Q02248
BC006739 AAH06739 Q02248
BC043481 AAH43481 Q80VE7
BC048153 AAH48153 Q02248
BC053065 AAH53065 Q02248
AK018515 BAB31250 Q02248
AK035311 BAC29027 Q02248
AK133656 BAE21768 Q3UZT7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctnnb1 NP_001159374 H.sapiens CTNNB1 1499 Gene Info NP_001091679 100
R.norvegicus Ctnnb1 84353   NP_445809 100
D.melanogaster arm 31151   NP_476665 73
A.gambiae ARM_ANOGA 1270538   XP_309245 72
C.elegans hmp-2 173338   NP_493566 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta