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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Txn2, thioredoxin 2
Sequence ID:NM_019913
Entrez Gene ID:56551
Ensembl ID:ENSMUSG00000005354

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 77915204 - 77928968

NM_019913 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18077774548077746286
8089317775497277755095
93211947775812177758383
119512827775933677759423

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30633447Full LengthBC068182thioredoxin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064297  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019913 NP_064297 P97493 Thioredoxin

Related Sequences

 
mRNAGenPeptSwissProt
U85089 AAB41900 P97493
BC068182 AAH68182 P97493
AK002358 BAB22037 P97493
AK010917 BAB27267 P97493
AK147164 BAE27729 P97493
AK149855 BAE29126 P97493
AK160591 BAE35898 Q3TUS3
AK167754 BAE39789 P97493
AK167925 BAE39930 P97493
AK168322 BAE40261 P97493

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Txn2 NP_064297 R.norvegicus Txn2 79462   NP_445783 95
H.sapiens TXN2 25828 Gene Info NP_036605 89
D.melanogaster CG8993 38301   NP_647716 49
A.gambiae TRX2 1269929   XP_308583 44
C.elegans trx-2 179434   NP_505651 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)