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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rdh11, retinol dehydrogenase 11
Sequence ID:NM_021557
Entrez Gene ID:17252
Ensembl ID:ENSMUSG00000066441

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12 32.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 79175550 - 79192150

NM_021557 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17008027653780277236
7018908028363980283828
89111008028611080286319
110112058028740080287504
120613618028946780289622
136214808028997580290093
148115748029271280292805

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4460226Full LengthBC018261retinol dehydrogenase 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067532  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021557 NP_067532 Q9QYF1 EC 1.1.1.300 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC018261 AAH18261 Q9QYF1 EC 1.1.1.300
AY039032 AAK91516 Q9QYF1 EC 1.1.1.300
AF474027 AAL79910 Q9QYF1 EC 1.1.1.300
AB030503 BAA82656 Q9R1R9  
AB030504 BAA82657 Q9R1R8  
AB035959 BAA88521 Q9QYF1 EC 1.1.1.300
AK004413 BAB23296 Q9QYF1 EC 1.1.1.300
AK135443 BAE22534 Q9QYF1 EC 1.1.1.300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rdh11 NP_067532 R.norvegicus Rdh11 362757   NP_001012193 87
H.sapiens RDH11 51109 Gene Info NP_057110 86
A.gambiae AgaP_AGAP007572 1269657   XP_308302 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)