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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ech1, enoyl coenzyme A hydratase 1, peroxisomal
Sequence ID:NM_016772
Entrez Gene ID:51798
Ensembl ID:ENSMUSG00000053898

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 28825337 - 28832239

NM_016772 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1752961035629610430
762802961089229611096
2813692961120329611291
3704942961481829614942
4955432961502029615068
5446082961523229615296
6096792961623529616305
6807512961640729616478
7529022961673529616885
90311382961702229617257

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5710971Full LengthBC068112enoyl coenzyme A hydratase 1, peroxisomal
6706361Full LengthBC087924enoyl coenzyme A hydratase 1, peroxisomal

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058052  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016772 NP_058052 O35459 ECH

Related Sequences

 
mRNAGenPeptSwissProt
AF030343 AAB84224 O35459
BC068112 AAH68112 O35459
BC087924 AAH87924 O35459

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ech1 NP_058052 R.norvegicus Ech1 64526   NP_072116 94
H.sapiens ECH1 1891 Gene Info NP_001389 74
D.melanogaster CG9577 33016   NP_608375 49
C.elegans F58A6.1 186486   NP_494954 48
N.crassa NCU06647 3877018   XP_960880 48
A.gambiae AgaP_AGAP002661 1273299   XP_312264 47
A.thaliana DCI1 834346   NP_199142 46
C.elegans Y25C1A.13 173657   NP_494448 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)