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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cast, calpastatin
Sequence ID:NM_009817
Entrez Gene ID:12380
Ensembl ID:ENSMUSG00000021585

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 74695892 - 74808760

 Exon Info From UCSC:
NM_009817

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3710078Full LengthBC010603calpastatin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033947  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009817 NP_033947 Q8CE80 Calpain_inhib

Related Sequences

 
mRNAGenPeptSwissProt
AF190151 AAF25193 Q3TTN2
P51125
AF190152 AAF25194 P51125
BC010603 AAH10603 Q921U7
AB026997 BAA84768 P51125
AK028843 BAC26149 Q8CE80
AK029293 BAC26377 Q8CE04
AK036576 BAC29486 Q8CB83
AK040688 BAC30668 Q8BS37
AK089108 BAC40755 Q8C281
AK161284 BAE36293 Q3TTN2
X62519 CAA44385 P51125

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cast NP_033947 R.norvegicus Cast 25403   NP_445747 85
H.sapiens CAST 831 Gene Info NP_001035905 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)