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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Klf9, Kruppel-like factor 9
Sequence ID:NM_010638
Entrez Gene ID:16601
Ensembl ID:ENSMUSG00000033863

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19|19 C1

Chromosomal Position (from UCSC)

Chromosomal Position:19: 23141225 - 23166911

NM_010638 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
110342321571523216748
103532632323917223241400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861746Full LengthBC138724Kruppel-like factor 9
8861747Full LengthBC138725Kruppel-like factor 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034768  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010638 NP_034768 Q8CEC4 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC138724 AAI38725 Q8CEC4
BC138725 AAI38726 Q8CEC4
AK028544 BAC26000 Q8CEC4
Y14296 CAA74671 O35739
CT010185 CAJ18393 Q8CEC4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Klf9 NP_034768 R.norvegicus Klf9 117560   NP_476559 99
H.sapiens KLF9 687 Gene Info NP_001197 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)