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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dynlt3, dynein light chain Tctex-type 3
Sequence ID:NM_025975
Entrez Gene ID:67117
Ensembl ID:ENSMUSG00000031176

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.1|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 9654270 - 9662916

NM_025975 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1179492313959233188
1795187292335059233582
1873199692341669234289
1997203892381059238146
2039215392399949240108

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1332100Full LengthBC030032dynein light chain Tctex-type 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080251  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025975 NP_080251 P56387
Q542J7
Tctex-1

Related Sequences

 
mRNAGenPeptSwissProt
BC030032 AAH30032 P56387
Q542J7
AK010186 BAB26754 Q9D6M5
AK018842 BAB31460 Q9D2T5
AK088277 BAC40252 P56387
Q542J7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dynlt3 NP_080251 H.sapiens DYNLT3 6990 Gene Info NP_006511 91
R.norvegicus Dynlt3 363448   NP_001013246 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)