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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abca9, ATP-binding cassette, sub-family A (ABC1), member 9
Sequence ID:NM_147220
Entrez Gene ID:217262
Ensembl ID:ENSMUSG00000041797

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 110100821 - 110168153

 Exon Info From UCSC:
NM_147220

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093237IncompleteBC169265ATP-binding cassette transporter sub-family A member 9
9093238IncompleteBC169266ATP-binding cassette transporter sub-family A member 9
9093239IncompleteBC169267ATP-binding cassette transporter sub-family A member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_671753  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_147220 NP_671753 Q8K449 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
AF491299 AAM90894 Q8K449
AK028451 BAC25959 Q8BIS4
AK029256 BAC26358 Q8K449

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abca9 NP_671753 R.norvegicus Abca9 287788   XP_221101 91
H.sapiens ABCA9 10350 Gene Info NP_525022 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)