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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sln, sarcolipin
Sequence ID:NM_025540
Entrez Gene ID:66402
Ensembl ID:ENSMUSG00000042045

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 C

Chromosomal Position (from UCSC)

Chromosomal Position:9: 53850251 - 53853844

NM_025540 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1765369805753698132
775205370121253701655

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1397989Full LengthBC028496sarcolipin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079816  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025540 NP_079816 Q9CQD6 Sarcolipin

Related Sequences

 
mRNAGenPeptSwissProt
BC028496 AAH28496 Q9CQD6
AK008896 BAB25959 Q9CQD6
AK009005 BAB26019 Q9CQD6
AK009809 BAB26516 Q9CQD6

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)