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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc11a1, solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
Sequence ID:NM_013612
Entrez Gene ID:18173
Ensembl ID:ENSMUSG00000026177

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1 39.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 74375224 - 74386052

 Exon Info From UCSC:
NM_013612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40039390Full LengthBC109137solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
40039397Full LengthBC109138solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013612 NP_038640 P41251 Nramp

Related Sequences

 
mRNAGenPeptSwissProt
L13732 AAA39838 P41251
BC109137 AAI09138 P41251
BC109138 AAI09139 P41251
AK171393 BAE42430 P41251
X75355 CAA53102 P41251

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc11a1 NP_038640 R.norvegicus Slc11a1 316519   NP_001026828 93
H.sapiens SLC11A1 6556 Gene Info NP_000569 88
A.thaliana NRAMP5 827613   NP_193614 49
S.cerevisiae SMF3 850721   NP_013134 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)