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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc36a2, solute carrier family 36 (proton/amino acid symporter), member 2
Sequence ID:NM_153170
Entrez Gene ID:246049
Ensembl ID:ENSMUSG00000020264

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 55158492 - 55185030

NM_153170 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111485497196954973116
114913185497614754976316
131914855497773454977900
148615845498233154982429
158518035498335554983573
180418885498816954988253
188919845499282654992921
198520735499420854994296
207421645499504654995136
216524315499831254998578

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4189221Full LengthBC044800solute carrier family 36 (proton/amino acid symporter), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153170 NP_694810 Q8BHK3 Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC044800 AAH44800 Q8BHK3
AF512429 AAM44854 Q8BHK3
AF453744 AAM80481 Q8BHK3
AY228366 AAO74833  
AK041041 BAC30795 Q8BHK3
AK079053 BAC37515 Q8BHK3
AK086373 BAC39656 Q8BHK3
AK156409 BAE33702 Q8BHK3
AK160394 BAE35764 Q8BHK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc36a2 NP_694810 R.norvegicus Slc36a2 246235   NP_647555 94
H.sapiens SLC36A2 153201 Gene Info NP_861441 82
A.gambiae AgaP_AGAP000473 1271765   XP_310618 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)