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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Htr6, 5-hydroxytryptamine (serotonin) receptor 6
Sequence ID:NM_021358
Entrez Gene ID:15565
Ensembl ID:ENSMUSG00000028747

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4 64.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 139061408 - 139074789

NM_021358 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1455138617323138617777
456614138617988138618146
6151362138629956138630703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40104888Full LengthBC1166525-hydroxytryptamine (serotonin) receptor 6
40104889Full LengthBC1166535-hydroxytryptamine (serotonin) receptor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067333  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021358 NP_067333 Q9R1C8 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF134158 AAD46490 Q9R1C8
BC116652 AAI16653 Q14AW8
BC116653 AAI16654 Q14AW8
AK134977 BAE22367 Q3UY46

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htr6 NP_067333 H.sapiens HTR6 3362 Gene Info NP_000862 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)