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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rnpep, arginyl aminopeptidase (aminopeptidase B)
Sequence ID:NM_001159624
NM_145417
Entrez Gene ID:215615
Ensembl ID:ENSMUSG00000041926

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 135262714 - 135284023

 Exon Info From UCSC:
NM_001159624
NM_145417

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5041005Full LengthBC019200arginyl aminopeptidase (aminopeptidase B)
4191718IncompleteBC010520arginyl aminopeptidase (aminopeptidase B)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663392  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001159624 NP_001153096      
NM_145417 NP_663392 Q8VCT3 EC 3.4.11.6 Peptidase_M1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019200 AAH19200 Q8VCT3 EC 3.4.11.6
AK031138 BAC27273 Q8BMH2  
AK159195 BAE34890 Q8VCT3 EC 3.4.11.6
AK159445 BAE35089 Q8VCT3 EC 3.4.11.6
AK159625 BAE35239 Q8VCT3 EC 3.4.11.6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rnpep NP_663392 R.norvegicus Rnpep 81761   NP_112359 94
H.sapiens RNPEP 6051 Gene Info NP_064601 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)