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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sp100, nuclear antigen Sp100
Sequence ID:NM_013673
Entrez Gene ID:20684
Ensembl ID:ENSMUSG00000026222

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C5|1 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 85650013 - 85682548

 Exon Info From UCSC:
NM_013673

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4911025Full LengthBC069183nuclear antigen Sp100
964034IncompleteBC028649nuclear antigen Sp100

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038701  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013673 NP_038701 O35892 SAND
Sp100

Related Sequences

 
mRNAGenPeptSwissProt
U83630 AAC53512 O35892
U83636 AAC53513 O35892
U83637 AAC53514 O35898
BC069183 AAH69183 Q6NTA3
AK042095 BAC31163 Q8C9H3
AK080004 BAC37804 Q8BNW8
AK083304 BAC38855 Q8C405
AK146054 BAE26863 Q3UKD8
AK152348 BAE31142 Q3U876
AK153487 BAE32035 Q3U5P2
CT010199 CAJ18407 Q4FK53

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sp100 NP_038701 R.norvegicus Sp100 363269   NP_001014242 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta