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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd6, CD6 antigen
Sequence ID:NM_001037801
NM_009852
Entrez Gene ID:12511
Ensembl ID:ENSMUSG00000024670

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 5.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10789346 - 10830027

 Exon Info From UCSC:
NM_001037801
NM_009852

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4187689Full LengthBC014294CD6 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033982  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037801 NP_001032890    
NM_009852 NP_033982 Q91WN5
Q61003
SRCR

Related Sequences

 
mRNAGenPeptSwissProt
U12434 AAA64867 Q61003
U37543 AAA81383 Q61003
U37544 AAA81384 Q61003
U35370 AAC52568  
BC014294 AAH14294 Q91WN5
AK030822 BAC27147 Q61003
AK030823 BAC27148 Q61003
AK088050 BAC40119 Q8BJC2
AK141213 BAE24592 Q3URU5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd6 NP_033982 R.norvegicus Cd6 25752   NP_783167 90
H.sapiens CD6 923 Gene Info NP_006716 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)