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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sod2, superoxide dismutase 2, mitochondrial
Sequence ID:NM_013671
Entrez Gene ID:20656
Ensembl ID:ENSMUSG00000006818

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A1|17 7.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 13007978 - 13015334

NM_013671 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12301320070413200933
2314331320104913201251
4345501320338513203501
5517301320629813206477
73138241320789113210984

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3581909Full LengthBC010548superoxide dismutase 2, mitochondrial
3587227IncompleteBC018173superoxide dismutase 2, mitochondrial
6849521IncompleteBC066063superoxide dismutase 2, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038699  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013671 NP_038699 P09671
Q4FJX9
EC 1.15.1.1 Sod_Fe_N
Sod_Fe_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC010548 AAH10548 P09671
Q4FJX9
EC 1.15.1.1
BC018173 AAH18173 P09671 EC 1.15.1.1
AK002428 BAB22095 P09671
Q4FJX9
EC 1.15.1.1
AK002534 BAB22170 P09671
Q4FJX9
EC 1.15.1.1
AK012354 BAB28183 P09671
Q4FJX9
EC 1.15.1.1
AK135435 BAE22531 P09671
Q4FJX9
EC 1.15.1.1
AK152047 BAE30903 Q3U8W4  
AK167521 BAE39593 Q3TJA2  
AK168082 BAE40055 P09671
Q4FJX9
EC 1.15.1.1
AK168591 BAE40460 P09671
Q4FJX9
EC 1.15.1.1
X04972 CAA28645 P09671 EC 1.15.1.1
Z18857 CAA79308 P09671
Q4FJX9
EC 1.15.1.1
CT010273 CAJ18481 P09671
Q4FJX9
EC 1.15.1.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sod2 NP_038699 R.norvegicus Sod2 24787   NP_058747 95
H.sapiens SOD2 6648 Gene Info NP_000627 90
A.gambiae MNSOD1 1275254   XP_314490 64
C.elegans sod-2 172632   NP_492290 63
A.thaliana MSD1 820263   NP_187703 61
D.melanogaster Sod2 36878   NP_476925 61
C.elegans sod-3 181748   NP_510764 61
N.crassa NCU09560 3875632   XP_959485 56
S.pombe SPAC1486.01 2542886   NP_594089 53
S.cerevisiae SOD2 856399   NP_011872 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta