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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lman1, lectin, mannose-binding, 1
Sequence ID:NM_001172062
NM_027400
Entrez Gene ID:70361
Ensembl ID:ENSMUSG00000041891

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 65983692 - 66002620

 Exon Info From UCSC:
NM_001172062
NM_027400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4948301Full LengthBC057165lectin, mannose-binding, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081676  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172062 NP_001165533    
NM_027400 NP_081676 Q9D0F3 Lectin_leg-like

Related Sequences

 
mRNAGenPeptSwissProt
BC057165 AAH57165 Q9D0F3
AK011495 BAB27655 Q9D0F3
AK151599 BAE30539 Q3U944
AK151949 BAE30823 Q3U944
AK153554 BAE32091 Q3U944

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lman1 NP_001165533 R.norvegicus Lman1 116666   NP_446338 96
H.sapiens LMAN1 3998 Gene Info NP_005561 89
A.gambiae AgaP_AGAP005404 1276104   XP_315413 47
D.melanogaster ergic53 44679   NP_524776 44
C.elegans ile-1 172799   NP_492548 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)