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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Pde6h, phosphodiesterase 6H, cGMP-specific, cone, gamma
Sequence ID:NM_023898
Entrez Gene ID:78600
Ensembl ID:ENSMUSG00000064330

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 136959260 - 136963269

NM_023898 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40104107Full LengthBC115671phosphodiesterase 6H, cGMP-specific, cone, gamma
40104108Full LengthBC115672phosphodiesterase 6H, cGMP-specific, cone, gamma
5357752IncompleteBC058192phosphodiesterase 6H, cGMP-specific, cone, gamma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076387  

Protein Infomation

NM_023898 NP_076387 P61249 EC PDE6_gamma

Related Sequences

AF189146 AAG17113 Q9ESC9  
AF190929 AAG17170 P61249 EC
BC115671 AAI15672 P61249 EC
BC115672 AAI15673 P61249 EC
AK020922 BAB32255 P61249 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pde6h NP_076387 R.norvegicus Pde6h 114248   NP_446140 99
H.sapiens PDE6H 5149 Gene Info NP_006196 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)