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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Notch1, notch 1
Sequence ID:NM_008714
Entrez Gene ID:18128
Ensembl ID:ENSMUSG00000026923

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 26476350 - 26477139

 Exon Info From UCSC:
NM_008714

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861461Full LengthBC138441Notch gene homolog 1 (Drosophila)
8861462Full LengthBC138442Notch gene homolog 1 (Drosophila)
5151692IncompleteBC023886Notch gene homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032740  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008714 NP_032740 Q01705 EGF
Ank
Notch
NOD
EGF_CA
NODP

Related Sequences

 
mRNAGenPeptSwissProt
BC138441 AAI38442 Q01705
BC138442 AAI38443 Q01705
L02613 AAK14898 Q01705
AF508809 AAM28905 Q01705
AK042197 BAC31194 Q8BY39
AK154528 BAE32653 Q01705
AK157475 BAE34095 Q01705
X68278 CAA48339 Q01705
X82562 CAA57909 Q01705
Z11886 CAA77941 Q01705
AJ238029 CAB40733 Q01705

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Notch1 NP_032740 R.norvegicus Notch1 25496   NP_001099191 98
H.sapiens NOTCH1 4851 Gene Info NP_060087 92
D.melanogaster N 31293   NP_476859 50
A.gambiae AgaP_AGAP001015 1270506   XP_309208 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta