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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Coro1a, coronin, actin binding protein 1A
Sequence ID:NM_009898
Entrez Gene ID:12721
Ensembl ID:ENSMUSG00000030707

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7 62.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 126699880 - 126703173

 Exon Info From UCSC:
NM_009898

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3484185Full LengthBC002136coronin, actin binding protein 1A
30076939Full LengthBC053398coronin, actin binding protein 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034028  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009898 NP_034028 O89053
Q3U1N0
WD40

Related Sequences

 
mRNAGenPeptSwissProt
U89399 AAC36506 O89053
AF047388 AAD31082 O89053
Q3U1N0
AF143955 AAD32703 O89053
BC002136 AAH02136 O89053
BC053398 AAH53398 O89053
AF495468 AAM18514 O89053
Q3U1N0
AK146290 BAE27047 O89053
Q3U1N0
AK150962 BAE29993 Q3U9K3
AK151755 BAE30663 Q3U9K3
AK155527 BAE33310 Q3U232
AK155860 BAE33465 O89053
Q3U1N0
AK165296 BAE38125 O89053
Q3U1N0
AK172447 BAE43009 Q3T9L1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Coro1a NP_034028 R.norvegicus Coro1a 155151   NP_569095 99
H.sapiens CORO1A 11151 Gene Info NP_001180262 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)