Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp6v1e1, ATPase, H+ transporting, lysosomal V1 subunit E1
Sequence ID:NM_007510
Entrez Gene ID:11973
Ensembl ID:ENSMUSG00000019210

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 120795245 - 120822687

NM_007510 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16536120745261120745781
537624120747894120747981
625719120751060120751154
720788120753325120753393
789878120754060120754149
879945120757603120757669
9461055120758379120758488
10561121120768351120768416
11221219120772605120772702

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2598896Full LengthBC003421ATPase, H+ transporting, lysosomal V1 subunit E1
3995744Full LengthBC055438ATPase, H+ transporting, lysosomal V1 subunit E1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031536  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007510 NP_031536 P50518 vATP-synt_E

Related Sequences

 
mRNAGenPeptSwissProt
BC003421 AAH03421 P50518
BC055438 AAH55438 P50518
AB074758 BAB92084 P50518
AK146162 BAE26943 P50518
AK149356 BAE28832 P50518
AK167644 BAE39695 P50518
AK169854 BAE41412 P50518

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v1e1 NP_031536 H.sapiens ATP6V1E1 529 Gene Info NP_001687 99
R.norvegicus Atp6v1e1 297566   NP_942040 99
D.melanogaster Vha26 40679   NP_730957 63
A.gambiae AgaP_AGAP002401 1273561   XP_312551 62
C.elegans vha-8 177442   NP_501040 58
N.crassa NCU07446 3880773   XP_964633 41
A.thaliana VHA-E2 820003   NP_187468 40
P.falciparum PFI1670c 813614   XP_001352210 40
S.pombe vma4 2543000   NP_594932 37
S.cerevisiae VMA4 854509   NP_014977 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)