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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mical1, microtubule associated monoxygenase, calponin and LIM domain containing 1
Sequence ID:NM_001164433
NM_138315
Entrez Gene ID:171580
Ensembl ID:ENSMUSG00000019823

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B1-B2|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 41476376 - 41487027

 Exon Info From UCSC:
NM_001164433
NM_138315

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3485807Full LengthBC034682microtubule associated monoxygenase, calponin and LIM domain containing 1
5343552Full LengthBC021477microtubule associated monoxygenase, calponin and LIM domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612188  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164433 NP_001157905    
NM_138315 NP_612188 Q8VDP3 CH
Pyr_redox_2

Related Sequences

 
mRNAGenPeptSwissProt
BC021477 AAH21477 Q8VDP3
BC034682 AAH34682 Q8VDP3
AK159369 BAE35027 Q8VDP3
AK170881 BAE42090 Q8VDP3
AK171234 BAE42330 Q8VDP3
AK171411 BAE42437 Q8VDP3
AK171429 BAE42447 Q8VDP3
AK171479 BAE42481 Q8VDP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mical1 NP_612188 R.norvegicus Mical1 294520   NP_001099867 91
H.sapiens MICAL1 64780 Gene Info NP_073602 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)