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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab39, RAB39, member RAS oncogene family
Sequence ID:NM_175562
Entrez Gene ID:270160
Ensembl ID:ENSMUSG00000055069

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 53686309 - 53706115

NM_175562 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126275349221453494840
262829715351399353514336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6511404Full LengthBC049787RAB39, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780771  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175562 NP_780771 Q8BHD0 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC049787 AAH49787 Q8BHD0
AK041076 BAC30810 Q8BLW7
AK049038 BAC33522 Q8BHD0
AK053487 BAC35399 Q8BHD0
AB232635 BAF02897 Q0PD15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab39 NP_780771 H.sapiens RAB39A 54734 Gene Info NP_059986 97
R.norvegicus Rab39a 315668   NP_001101618 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)