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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cnbp, cellular nucleic acid binding protein
Sequence ID:NM_001109745
NM_001109746
NM_013493
Entrez Gene ID:12785
Ensembl ID:ENSMUSG00000030057

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D1-D2

Chromosomal Position (from UCSC)

Chromosomal Position:6: 87843081 - 87851070

 Exon Info From UCSC:
NM_001109745
NM_001109746
NM_013493

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5705640Full LengthBC058723cellular nucleic acid binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038521  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001109745 NP_001103215    
NM_001109746 NP_001103216    
NM_013493 NP_038521 P53996
Q5QJQ9
zf-CCHC

Related Sequences

 
mRNAGenPeptSwissProt
L12693 AAA89198 P53996
U20326 AAB60490 P53996
Q5QJQ9
BC058723 AAH58723 P53996
Q5QJQ9
AK075760 BAC35938 Q3ULK8
P53996
AK078427 BAC37269 P53996
AK144740 BAE26042 P53996
Q5QJQ9
AK145444 BAE26440 Q3ULK8
AK146224 BAE26992 Q3ULK8
AK146301 BAE27058 Q3U935
AK146344 BAE27097 Q3ULK8
AK146367 BAE27117 Q3ULK8
AK146593 BAE27288 Q3ULK8
AK151317 BAE30298 Q3ULK8
AK151528 BAE30476 Q3ULK8
AK151961 BAE30832 Q3U935
AK153414 BAE31974 Q3U5V2
AK159810 BAE35390 P53996
Q5QJQ9
X63866 CAA45345 P53996
Z11870 CAA77896 P53996
Z11871 CAA77897 P53996

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnbp NP_001103215 H.sapiens CNBP 7555 Gene Info NP_001120666 100
R.norvegicus Cnbp 64530   NP_072120 100
A.gambiae AgaP_AGAP008075 1277873   XP_317381 51
S.cerevisiae GIS2 855466   NP_014144 47
D.melanogaster CG3800 37646   NP_611739 47
N.crassa NCU05800 3876191   XP_960060 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)