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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptprn, protein tyrosine phosphatase, receptor type, N
Sequence ID:NM_008985
Entrez Gene ID:19275
Ensembl ID:ENSMUSG00000026204

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1 41.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 75247497 - 75260642

 Exon Info From UCSC:
NM_008985

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062115Full LengthBC156648protein tyrosine phosphatase, receptor type, N
4987532IncompleteBC064020protein tyrosine phosphatase, receptor type, N
30361367IncompleteBC068165protein tyrosine phosphatase, receptor type, N
100015294BC148365protein tyrosine phosphatase, receptor type, N

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033011  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008985 NP_033011   Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProt
U11812 AAA52102 Q60673
BC064020 AAH64020 Q6P3E6
BC068165 AAH68165 Q6NVE2
BC148365 AAI48366  
BC156648 AAI56649  
AF332083 AAK56111 Q925J7
AF332084 AAK56112 Q925J6
DQ832283 ABI30217 A6MDD2
AK220467 BAD90494 Q5DTQ3
AK139398 BAE23994 Q3UTI6
X74438 CAA52453 Q60673
Z23060 CAA80595 Q64500

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptprn NP_033011 R.norvegicus Ptprn 116660   NP_446333 94
H.sapiens PTPRN 5798 Gene Info NP_002837 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)