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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Git1, G protein-coupled receptor kinase-interactor 1
Sequence ID:NM_001004144
Entrez Gene ID:216963
Ensembl ID:ENSMUSG00000011877

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 77505124 - 77507768

 Exon Info From UCSC:
NM_001004144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6831910Full LengthBC079870G protein-coupled receptor kinase-interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001004144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004144 NP_001004144 Q68FF6 Ank
ArfGap
GIT_SHD

Related Sequences

 
mRNAGenPeptSwissProt
BC079870 AAH79870 Q68FF6
AK050701 BAE20687 Q3V322

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Git1 NP_001004144 R.norvegicus Git1 83709   NP_114002 99
H.sapiens GIT1 28964 Gene Info NP_001078923 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)