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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scn3b, sodium channel, voltage-gated, type III, beta
Sequence ID:NM_001083917
NM_153522
NM_178227
Entrez Gene ID:235281
Ensembl ID:ENSMUSG00000049281

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.1|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 40290931 - 40291594

 Exon Info From UCSC:
NM_001083917
NM_153522
NM_178227

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5368626Full LengthBC032253sodium channel, voltage-gated, type III, beta
5702879Full LengthBC058636sodium channel, voltage-gated, type III, beta
6308278Full LengthBC053919sodium channel, voltage-gated, type III, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705742  NP_839941  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083917 NP_001077386    
NM_153522 NP_705742   ig
V-set
NM_178227 NP_839941 Q8BHK2 V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC032253 AAH32253 Q0P666
BC053919 AAH53919 Q8BHK2
BC058636 AAH58636 Q8BHK2
AY049036 AAL07512 Q8BHK2
AK049747 BAC33901 Q8BHK2
AK076466 BAC36356 Q8BHK2
AK173115 BAD32393 Q69ZQ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scn3b NP_839941 R.norvegicus Scn3b 245956   NP_620797 100
H.sapiens SCN3B 55800 Gene Info NP_001035241 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)