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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hbxip, hepatitis B virus x interacting protein
Sequence ID:NM_026774
Entrez Gene ID:68576
Ensembl ID:ENSMUSG00000087260

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 107279019 - 107284079

NM_026774 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1256107081775107082030
257318107082787107082848
319436107084826107084943
437881107086552107086996

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1513442Full LengthBC028547hepatitis B virus x interacting protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026774 NP_081050    

Related Sequences

 
mRNAGenPeptSwissProt
BC028547 AAH28547 Q9D1L9
AK003358 BAB22734 Q9D1L9
AK146289 BAE27046 Q9D1L9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hbxip NP_081050 R.norvegicus Hbxip 295357   NP_001099932 88
H.sapiens HBXIP 10542 Gene Info NP_006393 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta