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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Eif3e, Eukaryotic translation initiation factor 3, subunit E
Sequence ID:NM_008388
Entrez Gene ID:16341
Ensembl ID:ENSMUSG00000022336

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 B3.2|15 17.1

Chromosomal Position (from UCSC)

Chromosomal Position:15: 43250052 - 43282709

 Exon Info From UCSC:
NM_008388

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3988386Full LengthBC029177eukaryotic translation initiation factor 3, subunit E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032414  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008388 NP_032414 Q3UIG0
P60229
PCI

Related Sequences

 
mRNAGenPeptSwissProt
U54563 AAC53346 Q6LCK2
BC029177 AAH29177 Q3UIG0
P60229
AK011436 BAB27621 Q9CT23
AK145059 BAE26211 Q3UIG0
P60229
AK146936 BAE27546 Q3UIG0
P60229
AK161650 BAE36512 Q3UIG0
P60229
AK165929 BAE38465 Q3UIG0
P60229

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eif3e NP_032414 H.sapiens EIF3E 3646 Gene Info NP_001559 100
R.norvegicus Eif3e 299872   NP_001011990 100
D.melanogaster Int6 39877   NP_477385 61
A.gambiae EIF3E_ANOGA 1270140   XP_308812 60
A.thaliana EIF3E 824896   NP_567047 56
C.elegans eif-3.E 172959   NP_492785 51
S.pombe int6 2541089   NP_595367 45
N.crassa NCU05889 3875986   XP_959880 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)