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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ddb1, damage specific DNA binding protein 1
Sequence ID:NM_015735
Entrez Gene ID:13194
Ensembl ID:ENSMUSG00000024740

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 centromere|19 5.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10605624 - 10629821

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487617Full LengthBC009661damage specific DNA binding protein 1
3490286IncompleteBC002210damage specific DNA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056550  

Protein Infomation

NM_015735 NP_056550 Q3U1J4 CPSF_A

Related Sequences

AF159853 AAD42230 Q3U1J4
BC002210 AAH02210 Q3U1J4
BC009661 AAH09661 Q3U1J4
AB026432 BAA84699 Q3U1J4
AK145328 BAE26370 Q3ULS8
AK146522 BAE27231 Q3U1J4
AK152228 BAE31055 Q3U1J4
AK154303 BAE32502 Q3U1J4
AK155020 BAE32993 Q3U1J4
AK155920 BAE33503 Q3U1J4
AK157491 BAE34102 Q3U1J4
AJ416426 CAC94909 Q91YC8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ddb1 NP_056550 H.sapiens DDB1 1642 Gene Info NP_001914 100
R.norvegicus Ddb1 64470   XP_002728912 100
A.gambiae AgaP_AGAP002472 1273487   XP_312466 66
D.melanogaster pic 41611   NP_650257 62
A.thaliana DDB1A 825890   NP_192451 56
A.thaliana DDB1B 827857   NP_193842 55
N.crassa NCU06605 3878495   XP_962347 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)