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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cct7, chaperonin containing Tcp1, subunit 7 (eta)
Sequence ID:NM_007638
Entrez Gene ID:12468
Ensembl ID:ENSMUSG00000030007

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 85452046 - 85468380

 Exon Info From UCSC:
NM_007638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2648519Full LengthBC008255chaperonin containing Tcp1, subunit 7 (eta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031664  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007638 NP_031664 P80313
Q8C5Q5
Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
BC008255 AAH08255 P80313
Q3TIJ7
AK077781 BAC37005 Q8C5Q5
AK146902 BAE27516 Q3UIJ0
AK150160 BAE29350 Q3UDB1
AK166888 BAE39094 P80313
Q3TIJ7
AK167367 BAE39463 Q3TJN2
AK167827 BAE39849 P80313
Q3TIJ7
AK167938 BAE39942 P80313
Q3TIJ7
AK168087 BAE40060 P80313
Q3TIJ7
AK168272 BAE40218 Q3THH8
AK169426 BAE41168 Q3TET0
Z31399 CAA83274 P80313
Q3TIJ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cct7 NP_031664 R.norvegicus Cct7 297406   NP_001100073 99
H.sapiens CCT7 10574 Gene Info NP_006420 96
A.gambiae AgaP_AGAP002762 1273205   XP_312160 76
D.melanogaster Tcp-1eta 41054   NP_649835 75
A.thaliana AT3G11830 820356   NP_187789 67
S.pombe cct7 2540572   NP_596355 66
C.elegans cct-7 178670   NP_503522 66
N.crassa NCU09700 3875105   XP_958939 64
S.cerevisiae CCT7 853333   NP_012424 64
P.falciparum PFC0350c 814399   XP_001351157 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)