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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syt1, synaptotagmin I
Sequence ID:NM_001252341
NM_001252342
NM_009306
Entrez Gene ID:20979
Ensembl ID:ENSMUSG00000035864

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D1|10 58.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 108642309 - 109010946


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5365461Full LengthBC042519synaptotagmin I
6827709IncompleteBC048187synaptotagmin I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033332  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252341 NP_001239270    
NM_001252342 NP_001239271    
NM_009306 NP_033332 P46096 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC042519 AAH42519 P46096
D37792 BAA07040 P46096
AK078790 BAC37395 P46096
AK164153 BAE37652 Q3TPT3
FR827897 CBZ98840 P46096
H6RXZ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt1 NP_033332 R.norvegicus Syt1 25716   NP_001028852 100
H.sapiens SYT1 6857 Gene Info NP_005630 98
A.gambiae AgaP_AGAP007942 1278013   XP_317535 66
D.melanogaster Syt1 33473   NP_523460 61
C.elegans snt-1 174120   NP_495394 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)