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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ddx3x, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
Sequence ID:NM_010028
Entrez Gene ID:13205
Ensembl ID:ENSMUSG00000000787

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.1|X 42.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 13293345 - 13293982

 Exon Info From UCSC:
NM_010028

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9054302Full LengthBC172016DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
9087773Full LengthBC150862DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034158  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010028 NP_034158 Q62167
Q3TQX5
EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L25126 AAA53630 Q62167
Q3TQX5
EC 3.6.4.13
U42386 AAB08868    
BC150862 AAI50863 B9EKE9  
BC172016 AAI72016 B7ZWF1  
AK140990 BAE24540 Q62167
Q3TQX5
EC 3.6.4.13
AK163250 BAE37257 Q62167
Q3TQX5
EC 3.6.4.13
Z38117 CAA86261 Q62167
Q3TQX5
EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddx3x NP_034158 H.sapiens DDX3X 1654 Gene Info NP_001347 99
D.melanogaster bel 45826   NP_536783 66
C.elegans Y71H2AM.19 190611   NP_497615 57
A.thaliana AT3G58570 825026   NP_191416 56
C.elegans vbh-1 171888   NP_491112 55
S.cerevisiae DBP1 855984   NP_015206 55
A.thaliana AT3G58510 825020   NP_001030884 54
A.thaliana AT2G42520 818852   NP_181780 54
A.gambiae AgaP_AGAP003047 1272904   XP_311826 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)