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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abcg5, ATP-binding cassette, sub-family G (WHITE), member 5
Sequence ID:NM_031884
Entrez Gene ID:27409
Ensembl ID:ENSMUSG00000040505

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E4|17 54.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 84658233 - 84683011

 Exon Info From UCSC:
NM_031884

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40039484Full LengthBC106766ATP-binding cassette, sub-family G (WHITE), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114090  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031884 NP_114090 Q540E8
Q99PE8
ABC_tran
ABC2_membrane

Related Sequences

 
mRNAGenPeptSwissProt
AF312713 AAG53097 Q540E8
Q99PE8
BC106766 AAI06767 Q540E8
Q99PE8
AY195872 AAO45093 Q7TSR8
AY195873 AAO45094 Q540E8
Q99PE8
AK149569 BAE28965 Q540E8
Q99PE8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abcg5 NP_114090 R.norvegicus Abcg5 114628   NP_446206 93
H.sapiens ABCG5 64240 Gene Info NP_071881 80
D.melanogaster CG11069 42976   NP_651307 33
A.gambiae AgaP_AGAP002051 1281061   XP_320996 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta