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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst12, carbohydrate sulfotransferase 12
Sequence ID:NM_021528
Entrez Gene ID:59031
Ensembl ID:ENSMUSG00000036599

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140523539 - 140525238

NM_021528 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
188140981562140981649
891786140999494141001191

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3586766Full LengthBC003201carbohydrate sulfotransferase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067503  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021528 NP_067503 Q99LL3 EC 2.8.2.5 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003201 AAH03201 Q99LL3 EC 2.8.2.5
AK142155 BAE24951 Q99LL3 EC 2.8.2.5
AK163588 BAE37408 Q3TQH4  
AK170484 BAE41826 Q99LL3 EC 2.8.2.5
AK171208 BAE42314 Q99LL3 EC 2.8.2.5
AJ289132 CAB92140 Q99LL3 EC 2.8.2.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst12 NP_067503 R.norvegicus Chst12 304322   NP_001032864 98
H.sapiens CHST12 55501 Gene Info NP_061111 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)