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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hmgcs2, 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
Sequence ID:NM_008256
Entrez Gene ID:15360
Ensembl ID:ENSMUSG00000027875

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 98280434 - 98310732

NM_008256 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11579808435398084509
1586129809480998095263
6137389810005898100183
7399039810089298101056
90410699810130098101465
107012409810304298103212
124113479810549598105601
134814739810654498106669
147415859810708798107198
158632929811295298114658

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4216637Full LengthBC0147143-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
5123821Full LengthBC0247443-hydroxy-3-methylglutaryl-Coenzyme A synthase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032282  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008256 NP_032282 P54869 EC 2.3.3.10 HMG_CoA_synt_N
HMG_CoA_synt_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC014714 AAH14714 P54869 EC 2.3.3.10
BC024744 AAH24744 P54869 EC 2.3.3.10
AK004865 BAB23626 P54869 EC 2.3.3.10
AK004902 BAB23657 P54869 EC 2.3.3.10
AK098104 BAC05233 Q8N7N8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hmgcs2 NP_032282 R.norvegicus Hmgcs2 24450   NP_775117 98
H.sapiens HMGCS2 3158 Gene Info NP_005509 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)