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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nphs2, nephrosis 2 homolog, podocin (human)
Sequence ID:NM_130456
Entrez Gene ID:170484
Ensembl ID:ENSMUSG00000026602

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 G3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 156310799 - 156326138

NM_130456 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1333158240865158241197
334437158243105158243208
438510158246942158247014
511593158248818158248900
594797158251014158251217
798853158253867158253922
854932158255067158255145
9333108158255990158258165

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30470258Full LengthBC067401nephrosis 2 homolog, podocin (human)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_569723  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_130456 NP_569723 Q91X05 Band_7

Related Sequences

 
mRNAGenPeptSwissProt
BC067401 AAH67401 Q91X05
AY050309 AAL06146 Q91X05
FJ715770 ACN67095 C0LL94
FJ715771 ACN67096 C0LL95
FJ715772 ACN67097 C0LL95
FJ715773 ACN67098 C0LL95
FJ715774 ACN67099 C0LL98
FJ715775 ACN67100 C0LL99
FJ715776 ACN67101 C0LL95
AK052746 BAC35128 Q91X05
AJ302048 CAC44636 Q91X05

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nphs2 NP_569723 R.norvegicus Nphs2 170672   NP_570841 93
H.sapiens NPHS2 7827 Gene Info NP_055440 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)