Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arpc5, actin related protein 2/3 complex, subunit 5
Sequence ID:NM_026369
Entrez Gene ID:67771
Ensembl ID:ENSMUSG00000008475

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 A3

Chromosomal Position (from UCSC)

Chromosomal Position:1: 152766652 - 152775575

NM_026369 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1326154613671154613996
327399154615990154616062
400576154618493154618669
5771895154621389154622707

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6411792Full LengthBC060143actin related protein 2/3 complex, subunit 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080645  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026369 NP_080645 Q9CPW4 P16-Arc

Related Sequences

 
mRNAGenPeptSwissProt
BC060143 AAH60143 Q9CPW4
AK008097 BAB25457 Q9CPW4
AK011348 BAB27558 Q9CPW4
AK011911 BAB27911 Q9CPW4
AK017669 BAB30864 Q9CPW4
AK019149 BAB31570 Q9CPW4
AK087427 BAC39870 Q9CPW4
AK149756 BAE29064 Q9CPW4
AK150443 BAE29565 Q3UC32
AK150703 BAE29782 Q3UC32
AK151490 BAE30443 Q3UA72
AK151654 BAE30583 Q9CPW4
AK151656 BAE30585 Q9CPW4
AK152281 BAE31095 Q9CPW4
AK153262 BAE31852 Q9CPW4
AK159407 BAE35058 Q9CPW4
AK159438 BAE35084 Q9CPW4
AK159738 BAE35332 Q9CPW4
AK166284 BAE38681 Q9CPW4
AK166335 BAE38714 Q9CPW4
AK166725 BAE38972 Q9CPW4
AK166919 BAE39116 Q3TKM9
AK167144 BAE39289 Q3TK56
AK167916 BAE39923 Q9CPW4
AK168264 BAE40212 Q9CPW4
AK168986 BAE40786 Q9CPW4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arpc5 NP_080645 H.sapiens ARPC5 10092 Gene Info NP_005708 99
R.norvegicus Arpc5 360854   NP_001020888 99
D.melanogaster p16-ARC 33444   NP_608693 54
A.gambiae AgaP_AGAP008895 1279862   XP_319641 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)