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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Xrcc6, X-ray repair complementing defective repair in Chinese hamster cells 6
Sequence ID:NM_010247
Entrez Gene ID:14375
Ensembl ID:ENSMUSG00000022471

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E-F|15 47.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 82016427 - 82039988

 Exon Info From UCSC:
NM_010247

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3669715Full LengthBC031422X-ray repair complementing defective repair in Chinese hamster cells 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034377  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010247 NP_034377 P23475 SAP
Ku
Ku_C
Ku_N

Related Sequences

 
mRNAGenPeptSwissProt
M38700 AAA39396 P23475
BC031422 AAH31422 P23475
AF483500 AAL90774 P23475
AF483501 AAL90775 P23475
AB010282 BAA28874 P23475
AK143570 BAE25441 P23475
AK146392 BAE27135 P23475
AK146394 BAE27137 P23475
AK146396 BAE27139 P23475
Z14157 CAA78526 P23475

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Xrcc6 NP_034377 R.norvegicus Xrcc6 25019   NP_620780 94
H.sapiens XRCC6 2547 Gene Info NP_001460 84
A.gambiae AgaP_AGAP002690 1273271   XP_312232 35
A.thaliana KU70 838268   NP_564012 32
S.pombe pku70 2539090   NP_588445 30
N.crassa NCU08290 3878669   XP_962503 30
D.melanogaster Irbp 117419   NP_536773 28
S.cerevisiae YKU70 855328   NP_014011 26
C.elegans cku-70 176546   NP_499438 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta