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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ppp2cb, protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
Sequence ID:NM_017374
Entrez Gene ID:19053
Ensembl ID:ENSMUSG00000009630

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A4|8 20.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 33599988 - 33619794

NM_017374 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13983471009234710489
3996083472112634721335
6097823472221934722392
7838723472592134726010
87310343472613734726298
103511533472749834727616
115418363472959334730275

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3674696Full LengthBC019161protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
6515195Full LengthBC058582protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059070  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017374 NP_059070 P62715 EC 3.1.3.16 Metallophos

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019161 AAH19161 Q8VED4  
BC058582 AAH58582 P62715 EC 3.1.3.16
AK090311 BAC41164 Q8BN07  
Z67746 CAA91559 P62715 EC 3.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppp2cb NP_059070 H.sapiens PPP2CB 5516 Gene Info NP_001009552 100
R.norvegicus Ppp2cb 24673   NP_058736 100
D.melanogaster mts 45959   NP_476805 94
A.gambiae AgaP_AGAP010172 1279592   XP_319345 93
C.elegans let-92 178117   NP_502247 90
S.pombe ppa1 2542052   NP_593842 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)