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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prrx1, paired related homeobox 1
Sequence ID:NM_001025570
NM_011127
NM_175686
Entrez Gene ID:18933
Ensembl ID:ENSMUSG00000026586

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.1|1 85.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 163248257 - 163312635

 Exon Info From UCSC:
NM_001025570
NM_011127
NM_175686

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30533016Full LengthBC092372paired related homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020741  NP_783617  NP_035257  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025570 NP_001020741   Homeobox
NM_011127 NP_035257 P63013 Homeobox
OAR
NM_175686 NP_783617   Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
L06502 AAA39672 P63013
U03873 AAC52139 P63013
BC092372 AAH92372 P63013
AK008112 BAB25468 Q9D8E1
AK008428 BAB25663 Q9D861
AK038524 BAC30027 Q8BGB1
AK165914 BAE38458 Q3TMI4
X59725 CAA42410 P63013

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prrx1 NP_035257 H.sapiens PRRX1 5396 Gene Info NP_073207 100
R.norvegicus Prrx1 266813   NP_722543 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)