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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cmtm6, CKLF-like MARVEL transmembrane domain containing 6
Sequence ID:NM_026036
Entrez Gene ID:67213
Ensembl ID:ENSMUSG00000032434

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 114748094 - 114749343

NM_026036 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1171114640320114640490
172348114646300114646476
349447114649176114649274
4483352114655556114658460

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2811938Full LengthBC027248CKLF-like MARVEL transmembrane domain containing 6
3593959IncompleteBC007194CKLF-like MARVEL transmembrane domain containing 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080312  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026036 NP_080312 Q9CZ69 MARVEL

Related Sequences

 
mRNAGenPeptSwissProt
BC007194 AAH07194 Q9CZ69
BC027248 AAH27248 Q9CZ69
AY241868 AAP33490 Q9CZ69
AK012941 BAB28562 Q9CZ69
AK030885 BAC27172 Q9CZ69
AK145743 BAE26621 Q3UL30
AK151249 BAE30239 Q3UAS5
AK152448 BAE31227 Q9CZ69
AK152723 BAE31446 Q9CZ69
AK152817 BAE31520 Q9CZ69
AK154481 BAE32617 Q9CZ69
AK159439 BAE35085 Q3TX31
AK159735 BAE35329 Q9CZ69
AK165948 BAE38480 Q9CZ69
AK167499 BAE39575 Q9CZ69
AK167854 BAE39872 Q9CZ69
AK170905 BAE42106 Q9CZ69
AK171394 BAE42431 Q9CZ69

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cmtm6 NP_080312 R.norvegicus Cmtm6 316035   NP_001007803 96
H.sapiens CMTM6 54918 Gene Info NP_060271 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)