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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hbb-b2, hemoglobin, beta adult minor chain
Sequence ID:NM_016956
Entrez Gene ID:15130

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7 50.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 103826664 - 103827872

NM_016956 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
23283110961037110961297
284506110961952110962174
507632110962291110962416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3988455Full LengthBC032264hemoglobin, beta adult minor chain
4920093Full LengthBC027434hemoglobin, beta adult minor chain

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001201391 NP_001188320    
NM_016956 NP_058652 P02089
Q549D9
Q54AH9
Globin

Related Sequences

 
mRNAGenPeptSwissProt
AF149782 AAD41830 P02089
Q549D9
Q54AH9
AF071431 AAD49106 Q9R1N1
BC027434 AAH27434 P02089
Q549D9
Q54AH9
BC032264 AAH32264 Q9QUN8
P02089
AB020014 BAA77354 Q9QUN8
AB020016 BAA77356 Q9QUN8
AB020017 BAA77357 P02089
Q549D9
Q54AH9
AB364478 BAG16713 Q549D9

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)