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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Spp1, secreted phosphoprotein 1
Sequence ID:NM_001204201
NM_001204202
NM_001204203
NM_001204233
NM_009263
Entrez Gene ID:20750
Ensembl ID:ENSMUSG00000029304

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 104436388 - 104440617

Transcript StartTranscript EndChromosomal Start Chromosomal End
179104864136104864214
80147104865393104865460
148183104865559104865594
184264104866673104866753
265306104867244104867285
307588104868283104868564
5891410104869247104870068

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3489075Full LengthBC002113secreted phosphoprotein 1
5252869Full LengthBC080720secreted phosphoprotein 1
5294167Full LengthBC057858secreted phosphoprotein 1
3666877IncompleteBC014284secreted phosphoprotein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033289  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204201 NP_001191130    
NM_001204202 NP_001191131    
NM_001204203 NP_001191132    
NM_001204233 NP_001191162    
NM_009263 NP_033289 P10923 Osteopontin

Related Sequences

 
mRNAGenPeptSwissProt
J04806 AAA57265 P10923
S78177 AAB34351  
BC002113 AAH02113 Q6PKE3
BC014284 AAH14284 P10923
BC057858 AAH57858 P10923
Q547B5
BC080720 AAH80720 Q6PKE3
AF515708 AAM53974 P10923
Q547B5
AK133555 BAE21722 Q3UZY3
AK145099 BAE26234 Q3TLP1
AK149588 BAE28978 P10923
Q547B5
AK150819 BAE29882 P10923
Q547B5
AK150845 BAE29903 Q3UBR1
AK151069 BAE30085 P10923
Q547B5
AK151562 BAE30504 P10923
Q547B5
AK154908 BAE32918 P10923
Q547B5
AK160540 BAE35857 P10923
Q547B5
AK165393 BAE38157 Q3TND2
AK166395 BAE38751 Q3TLP1
AK171158 BAE42282 P10923
Q547B5
X13986 CAA32165 P10923
Q547B5
X16151 CAA34276 P10923
CT010357 CAJ18565 P10923
Q547B5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Spp1 NP_033289 R.norvegicus LOC100359743 100359743   XP_002728123 84
H.sapiens SPP1 6696 Gene Info NP_001035149 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta