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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smg6, Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
Sequence ID:NM_001002764
Entrez Gene ID:103677
Ensembl ID:ENSMUSG00000038290

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B5|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 75161379 - 75164507

 Exon Info From UCSC:
NM_001002764

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6410245Full LengthBC066040Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
3595449IncompleteBC016550Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
6506135IncompleteBC077715Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002764 NP_001002764 P61406  

Related Sequences

 
mRNAGenPeptSwissProt
BC016550 AAH16550 A0PJ64
BC066040 AAH66040 P61406
AK129203 BAC98013 P61406

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smg6 NP_001002764 R.norvegicus Smg6 287522   NP_001099278 97
H.sapiens SMG6 23293 Gene Info NP_060045 91
D.melanogaster Smg6 42994   NP_651321 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)