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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1d, C1D nuclear receptor co-repressor
Sequence ID:NM_020558
Entrez Gene ID:57316
Ensembl ID:ENSMUSG00000000581

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 17257611 - 17268886

NM_020558 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1411715762017157660
421881716265017162796
1892551716361117163677
2563111716395317164008
31229571716653317169178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591682Full LengthBC005436C1D nuclear receptor co-repressor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065583  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020558 NP_065583 O35473 C1D

Related Sequences

 
mRNAGenPeptSwissProt
BC005436 AAH05436 O35473
AK028702 BAC26075 O35473
AK035169 BAC28967 O35473
X95591 CAA64844 O35473

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1d NP_065583 R.norvegicus C1d 289810   NP_001099491 97
H.sapiens C1D 10438 Gene Info NP_775269 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)