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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sco2, SCO cytochrome oxidase deficient homolog 2 (yeast)
Sequence ID:NM_001111288
Entrez Gene ID:100126824
Ensembl ID:ENSMUSG00000091780

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 89371930 - 89377037

NM_001111288 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
148428920206789202895
84310228920385389204032
102311588920411389204248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4163864Full LengthBC019554SCO cytochrome oxidase deficient homolog 2 (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612175  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001111288 NP_001104758 Q8VCL2    
NM_138302 NP_612175 Q99N42 EC 2.4.2.4 Glycos_transf_3
Glycos_trans_3N
PYNP_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019554 AAH19554 Q8VCL2  
AK013765 BAB28986 Q9D6E8  
AB060274 BAB41208 Q99N42 EC 2.4.2.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sco2 NP_001104758 H.sapiens SCO2 9997   NP_001162580 81
S.cerevisiae SCO2 852312   NP_009580 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)